Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 AC006557.2-201ENST00000592985 1240 ntBASIC14.29□□□□□ -0.12
RFT1Q96AA3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.29□□□□□ -0.12
RFT1Q96AA3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.28□□□□□ -0.12
RFT1Q96AA3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 RPS15P9-201ENST00000494093 319 ntBASIC14.28□□□□□ -0.12
RFT1Q96AA3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 AC107918.2-201ENST00000530817 355 ntBASIC14.28□□□□□ -0.12
RFT1Q96AA3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 AC091167.2-201ENST00000579581 588 ntBASIC14.28□□□□□ -0.12
RFT1Q96AA3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.28□□□□□ -0.12
RFT1Q96AA3 IFNL4P1-201ENST00000607083 540 ntBASIC14.28□□□□□ -0.12
RFT1Q96AA3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFT1Q96AA3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RFT1Q96AA3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 PCGF3-213ENST00000620529 1899 ntBASIC14.27□□□□□ -0.12
RFT1Q96AA3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFT1Q96AA3 LINC01101-201ENST00000622953 1884 ntBASIC14.27□□□□□ -0.12
RFT1Q96AA3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms