Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 CYP2T1P-202ENST00000641596 2535 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 AC004987.2-201ENST00000395959 1148 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 TREML5P-201ENST00000421694 576 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 DUX4L27-201ENST00000554796 1261 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 AL133215.2-201ENST00000609242 977 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 AL596087.1-201ENST00000400979 1969 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 FO538757.1-201ENST00000623083 1397 ntBASIC14.43□□□□□ -0.1
CPNE4Q96A23 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 DOC2GP-204ENST00000639052 2548 ntBASIC14.42□□□□□ -0.1
CPNE4Q96A23 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 AC055876.3-201ENST00000431496 288 ntBASIC14.42□□□□□ -0.1
CPNE4Q96A23 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 AC027369.6-201ENST00000525520 931 ntBASIC14.42□□□□□ -0.1
CPNE4Q96A23 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 AL079307.3-201ENST00000556114 283 ntBASIC14.42□□□□□ -0.1
CPNE4Q96A23 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 AC138649.4-201ENST00000612222 287 ntBASIC14.42□□□□□ -0.1
CPNE4Q96A23 SPDYE12P-201ENST00000618416 771 ntBASIC14.42□□□□□ -0.1
CPNE4Q96A23 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 CYP4F24P-201ENST00000586049 1580 ntBASIC14.42□□□□□ -0.1
CPNE4Q96A23 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE4Q96A23 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE4Q96A23 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE4Q96A23 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE4Q96A23 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE4Q96A23 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE4Q96A23 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CPNE4Q96A23 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CPNE4Q96A23 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE4Q96A23 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE4Q96A23 AL691432.1-201ENST00000596308 1422 ntBASIC14.41□□□□□ -0.1
CPNE4Q96A23 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE4Q96A23 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CPNE4Q96A23 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE4Q96A23 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CPNE4Q96A23 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE4Q96A23 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms