Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 TIMM8BP1-201ENST00000452384 211 ntBASIC14.09□□□□□ -0.15
SPTSSAQ969W0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 RNA5SP410-201ENST00000516285 106 ntBASIC14.09□□□□□ -0.15
SPTSSAQ969W0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 KRT8P23-201ENST00000560090 1207 ntBASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SPTSSAQ969W0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.08□□□□□ -0.15
SPTSSAQ969W0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.08□□□□□ -0.15
SPTSSAQ969W0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSAQ969W0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSAQ969W0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSAQ969W0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSAQ969W0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
SPTSSAQ969W0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 GPX1P2-201ENST00000429271 606 ntBASIC14.08□□□□□ -0.16
SPTSSAQ969W0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 OR2I1P-209ENST00000641730 5365 ntBASIC14.08□□□□□ -0.16
SPTSSAQ969W0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSAQ969W0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AL162727.3-201ENST00000635661 2787 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms