Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNKSR1Q969H4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNKSR1Q969H4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.39■□□□□ 0.7
CNKSR1Q969H4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 MTX1P1-201ENST00000440904 838 ntBASIC19.39■□□□□ 0.69
CNKSR1Q969H4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 HOMER2P2-201ENST00000451621 847 ntBASIC19.39■□□□□ 0.69
CNKSR1Q969H4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 AC079328.1-201ENST00000560358 952 ntBASIC19.39■□□□□ 0.69
CNKSR1Q969H4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR1Q969H4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 BX284668.4-201ENST00000453917 508 ntBASIC19.38■□□□□ 0.69
CNKSR1Q969H4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 AC104982.3-201ENST00000581995 514 ntBASIC19.38■□□□□ 0.69
CNKSR1Q969H4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR1Q969H4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AL138709.1-201ENST00000614840 1693 ntBASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AC015818.8-201ENST00000587907 1519 ntBASIC19.37■□□□□ 0.69
CNKSR1Q969H4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AL662890.1-201ENST00000396818 632 ntBASIC19.37■□□□□ 0.69
CNKSR1Q969H4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 FNTAP2-201ENST00000430308 634 ntBASIC19.37■□□□□ 0.69
CNKSR1Q969H4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AC005077.2-201ENST00000449786 690 ntBASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 EEF1DP1-201ENST00000585891 896 ntBASIC19.37■□□□□ 0.69
CNKSR1Q969H4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.37■□□□□ 0.69
CNKSR1Q969H4 AC020914.3-201ENST00000594712 304 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms