Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 ACTBP8-201ENST00000403258 1108 ntBASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 FAM21FP-201ENST00000426241 1131 ntBASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 AC009542.2-202ENST00000619004 1067 ntBASIC24.45■■□□□ 1.51
CASKIN1Q8WXD9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CASKIN1Q8WXD9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 AC079316.1-201ENST00000548397 411 ntBASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 MIR6869-201ENST00000619434 62 ntBASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 AP005019.2-201ENST00000615104 511 ntBASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASKIN1Q8WXD9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 AL138799.1-201ENST00000448213 1675 ntBASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 AC022188.1-201ENST00000620960 1664 ntBASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASKIN1Q8WXD9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 AC112504.1-201ENST00000623415 1841 ntBASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 PCDHA14-201ENST00000506751 2298 ntBASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 FAM86HP-204ENST00000513466 959 ntBASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 AC025181.2-201ENST00000606994 802 ntBASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CASKIN1Q8WXD9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms