Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC134407.2-201ENST00000625089 1978 ntBASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 PMS2P7-201ENST00000506558 1336 ntBASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 SLC25A1P1-201ENST00000528351 927 ntBASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AC002347.1-201ENST00000569543 541 ntBASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AC092865.6-201ENST00000642101 219 ntBASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLHC1Q8NHS4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AL590627.1-203ENST00000421194 1026 ntBASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AC074386.1-202ENST00000463561 864 ntBASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 PDPK2P-202ENST00000562415 1191 ntBASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AL138918.1-201ENST00000568306 659 ntBASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AL365330.1-201ENST00000607459 531 ntBASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.44■□□□□ 0.06
CLHC1Q8NHS4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLHC1Q8NHS4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.43■□□□□ 0.06
CLHC1Q8NHS4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.43■□□□□ 0.06
CLHC1Q8NHS4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.43■□□□□ 0.06
CLHC1Q8NHS4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CLHC1Q8NHS4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLHC1Q8NHS4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLHC1Q8NHS4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms