Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 KRT18P43-201ENST00000469825 1281 ntBASIC19.58■□□□□ 0.73
RTL9Q8NET4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL9Q8NET4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL9Q8NET4 NKILA-202ENST00000614771 2598 ntBASIC19.58■□□□□ 0.72
RTL9Q8NET4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL9Q8NET4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.58■□□□□ 0.72
RTL9Q8NET4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL9Q8NET4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL9Q8NET4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL9Q8NET4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RTL9Q8NET4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.58■□□□□ 0.72
RTL9Q8NET4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 AL359711.2-201ENST00000563105 872 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 AL049840.4-201ENST00000602422 811 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 AC133539.2-201ENST00000604757 467 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 KRT8P22-201ENST00000562317 1415 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 ACTG1P3-201ENST00000431775 1114 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL9Q8NET4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 RPL13AP25-201ENST00000484130 612 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.57■□□□□ 0.72
RTL9Q8NET4 AC120045.2-201ENST00000567334 178 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 MIR4525-201ENST00000580000 75 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 AC133552.6-201ENST00000613406 534 ntBASIC19.57■□□□□ 0.72
RTL9Q8NET4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms