Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 HLA-J-203ENST00000494367 1087 ntBASIC14.06□□□□□ -0.16
CPEB3Q8NE35 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AC109322.1-201ENST00000524499 1264 ntBASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AP001059.3-201ENST00000619053 235 ntBASIC14.06□□□□□ -0.16
CPEB3Q8NE35 LINC00628-201ENST00000628516 1289 ntBASIC14.06□□□□□ -0.16
CPEB3Q8NE35 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.06□□□□□ -0.16
CPEB3Q8NE35 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 TSEN15P1-201ENST00000423257 515 ntBASIC14.05□□□□□ -0.16
CPEB3Q8NE35 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AC003101.2-201ENST00000612557 442 ntBASIC14.05□□□□□ -0.16
CPEB3Q8NE35 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms