Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SLC17A8Q8NDX2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 TUBB1P2-201ENST00000422712 1306 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 TUBB1P1-201ENST00000503144 1300 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 FAM220BP-201ENST00000377689 816 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 GPAA1P2-201ENST00000417923 928 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 PFN1P12-201ENST00000455938 534 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AC108725.1-201ENST00000495472 409 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 REXO1L8P-201ENST00000604378 1897 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AL021578.1-201ENST00000613646 709 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AC015967.2-201ENST00000624092 234 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AC006435.4-201ENST00000625037 234 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 AL356737.1-201ENST00000634391 234 ntBASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC17A8Q8NDX2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 AC006449.6-201ENST00000612330 2296 ntBASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 CYP2T1P-202ENST00000641596 2535 ntBASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC17A8Q8NDX2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 MIR1247-201ENST00000408206 136 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 HINT2P1-201ENST00000419438 481 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 GNAQP1-201ENST00000444815 1067 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 WASH4P-201ENST00000564273 1246 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 CHCHD2P3-201ENST00000603038 451 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 AC008738.7-201ENST00000609744 511 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC17A8Q8NDX2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms