Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 LINC01115-203ENST00000606068 577 ntBASIC16.41■□□□□ 0.22
SIX5Q8N196 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.41■□□□□ 0.22
SIX5Q8N196 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SIX5Q8N196 AL158212.4-201ENST00000624062 1286 ntBASIC16.41■□□□□ 0.22
SIX5Q8N196 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 AL512652.2-201ENST00000625156 1716 ntBASIC16.41■□□□□ 0.22
SIX5Q8N196 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX5Q8N196 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 CYP4F24P-201ENST00000586049 1580 ntBASIC16.4■□□□□ 0.22
SIX5Q8N196 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SIX5Q8N196 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX5Q8N196 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 AL355864.2-201ENST00000447420 863 ntBASIC16.4■□□□□ 0.22
SIX5Q8N196 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.4■□□□□ 0.22
SIX5Q8N196 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SIX5Q8N196 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX5Q8N196 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.4■□□□□ 0.22
SIX5Q8N196 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.4■□□□□ 0.22
SIX5Q8N196 AL359711.2-201ENST00000563105 872 ntBASIC16.4■□□□□ 0.22
SIX5Q8N196 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.4■□□□□ 0.22
SIX5Q8N196 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.4■□□□□ 0.22
SIX5Q8N196 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.4■□□□□ 0.22
SIX5Q8N196 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX5Q8N196 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SIX5Q8N196 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SIX5Q8N196 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SIX5Q8N196 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
SIX5Q8N196 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.4■□□□□ 0.22
SIX5Q8N196 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 AC103702.1-201ENST00000548801 2630 ntBASIC16.4■□□□□ 0.22
SIX5Q8N196 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SIX5Q8N196 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX5Q8N196 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX5Q8N196 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 AC092068.3-201ENST00000587894 2016 ntBASIC16.4■□□□□ 0.22
SIX5Q8N196 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX5Q8N196 PCDHB17P-201ENST00000539533 2393 ntBASIC16.4■□□□□ 0.22
SIX5Q8N196 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SIX5Q8N196 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SIX5Q8N196 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.39■□□□□ 0.21
SIX5Q8N196 AL136982.4-201ENST00000437689 1740 ntBASIC16.39■□□□□ 0.21
SIX5Q8N196 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.39■□□□□ 0.21
SIX5Q8N196 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.39■□□□□ 0.21
SIX5Q8N196 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.39■□□□□ 0.21
SIX5Q8N196 AP001889.1-201ENST00000525414 633 ntBASIC16.39■□□□□ 0.21
SIX5Q8N196 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.39■□□□□ 0.21
SIX5Q8N196 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.39■□□□□ 0.21
SIX5Q8N196 AP000812.2-201ENST00000538934 718 ntBASIC16.39■□□□□ 0.21
SIX5Q8N196 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.39■□□□□ 0.21
SIX5Q8N196 RHOQP1-201ENST00000555758 579 ntBASIC16.39■□□□□ 0.21
SIX5Q8N196 AL391069.4-201ENST00000609583 481 ntBASIC16.39■□□□□ 0.21
SIX5Q8N196 AC009542.2-202ENST00000619004 1067 ntBASIC16.39■□□□□ 0.21
SIX5Q8N196 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.39■□□□□ 0.21
SIX5Q8N196 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.39■□□□□ 0.21
SIX5Q8N196 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX5Q8N196 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.39■□□□□ 0.21
SIX5Q8N196 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms