Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 AZGP1P1-201ENST00000411909 902 ntBASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 AC114501.2-201ENST00000439631 535 ntBASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 DOC2GP-202ENST00000514950 1163 ntBASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 AC025048.3-201ENST00000590609 569 ntBASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 AL662799.1-202ENST00000614205 422 ntBASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 AC005702.4-201ENST00000618393 416 ntBASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN4BQ8IWT1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 AP001282.1-201ENST00000531301 1499 ntBASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 AC004790.1-201ENST00000612686 536 ntBASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN4BQ8IWT1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms