Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 AL590787.1-201ENST00000568856 1315 ntBASIC16■□□□□ 0.15
APLFQ8IW19 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16■□□□□ 0.15
APLFQ8IW19 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16■□□□□ 0.15
APLFQ8IW19 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16■□□□□ 0.15
APLFQ8IW19 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16■□□□□ 0.15
APLFQ8IW19 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16■□□□□ 0.15
APLFQ8IW19 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16■□□□□ 0.15
APLFQ8IW19 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16■□□□□ 0.15
APLFQ8IW19 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16■□□□□ 0.15
APLFQ8IW19 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16■□□□□ 0.15
APLFQ8IW19 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16■□□□□ 0.15
APLFQ8IW19 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16■□□□□ 0.15
APLFQ8IW19 AC093028.1-201ENST00000622998 982 ntBASIC16■□□□□ 0.15
APLFQ8IW19 AC105339.1-204ENST00000636249 355 ntBASIC16■□□□□ 0.15
APLFQ8IW19 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 LINC00528-201ENST00000600723 2160 ntBASIC16■□□□□ 0.15
APLFQ8IW19 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
APLFQ8IW19 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
APLFQ8IW19 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
APLFQ8IW19 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.99■□□□□ 0.15
APLFQ8IW19 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.99■□□□□ 0.15
APLFQ8IW19 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
APLFQ8IW19 AL139400.1-201ENST00000366220 510 ntBASIC15.99■□□□□ 0.15
APLFQ8IW19 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.99■□□□□ 0.15
APLFQ8IW19 FAM185BP-201ENST00000443595 716 ntBASIC15.99■□□□□ 0.15
APLFQ8IW19 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.99■□□□□ 0.15
APLFQ8IW19 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.99■□□□□ 0.15
APLFQ8IW19 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.99■□□□□ 0.15
APLFQ8IW19 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
APLFQ8IW19 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.99■□□□□ 0.15
APLFQ8IW19 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
APLFQ8IW19 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
APLFQ8IW19 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.99■□□□□ 0.15
APLFQ8IW19 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
APLFQ8IW19 AC006486.2-201ENST00000624246 2199 ntBASIC15.99■□□□□ 0.15
APLFQ8IW19 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
APLFQ8IW19 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
APLFQ8IW19 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
APLFQ8IW19 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.98■□□□□ 0.15
APLFQ8IW19 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
APLFQ8IW19 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
APLFQ8IW19 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
APLFQ8IW19 ME2P1-201ENST00000426028 1970 ntBASIC15.98■□□□□ 0.15
APLFQ8IW19 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
APLFQ8IW19 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
APLFQ8IW19 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.98■□□□□ 0.15
APLFQ8IW19 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms