Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL671277.1-201ENST00000429656 993 ntBASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 TFAMP1-201ENST00000412727 736 ntBASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 POLD2P1-201ENST00000511220 997 ntBASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00346Q8IVM7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 GPX1P2-201ENST00000429271 606 ntBASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms