Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 LINC01230-201ENST00000625222 3017 ntBASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 MIR718-201ENST00000390190 70 ntBASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 CYP2D8P-201ENST00000433633 1490 ntBASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 KRT17P2-201ENST00000300992 1314 ntBASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CROCCP3Q8IVE0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 AC132938.5-201ENST00000624980 1813 ntBASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 GUSBP12-201ENST00000513727 720 ntBASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 AC112693.3-201ENST00000624819 1983 ntBASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms