Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 PI4KAP1-204ENST00000612579 1703 ntBASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 AC136632.2-201ENST00000512891 861 ntBASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 AL109954.1-202ENST00000564051 2148 ntBASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 AC007326.2-201ENST00000624224 7579 ntBASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 MYO15B-237ENST00000642007 4893 ntBASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF3Q8IUI8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 ELK2BP-201ENST00000415014 1224 ntBASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 AC140113.2-201ENST00000604370 208 ntBASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 AC027601.4-201ENST00000611259 610 ntBASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 PMS2P7-201ENST00000506558 1336 ntBASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 U82695.1-201ENST00000635752 1889 ntBASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF3Q8IUI8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 AC006504.4-201ENST00000592118 1568 ntBASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CRLF3Q8IUI8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms