Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 RNA5SP410-201ENST00000516285 106 ntBASIC16.72■□□□□ 0.27
RFX6Q8HWS3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 AC011477.6-201ENST00000604980 1927 ntBASIC16.71■□□□□ 0.27
RFX6Q8HWS3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 MCCD1P2-201ENST00000423228 335 ntBASIC16.71■□□□□ 0.27
RFX6Q8HWS3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.71■□□□□ 0.27
RFX6Q8HWS3 KRT8P48-201ENST00000515599 1220 ntBASIC16.71■□□□□ 0.27
RFX6Q8HWS3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 AC243562.1-201ENST00000560672 389 ntBASIC16.71■□□□□ 0.27
RFX6Q8HWS3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 AC026120.1-201ENST00000611536 926 ntBASIC16.71■□□□□ 0.27
RFX6Q8HWS3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX6Q8HWS3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.71■□□□□ 0.26
RFX6Q8HWS3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFX6Q8HWS3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFX6Q8HWS3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 LINC00554-201ENST00000564841 3011 ntBASIC16.7■□□□□ 0.26
RFX6Q8HWS3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 ADH5P3-201ENST00000433842 1137 ntBASIC16.7■□□□□ 0.26
RFX6Q8HWS3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 PGAM5P1-201ENST00000518923 814 ntBASIC16.7■□□□□ 0.26
RFX6Q8HWS3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 AC061975.2-201ENST00000581722 295 ntBASIC16.7■□□□□ 0.26
RFX6Q8HWS3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms