Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 EEF1DP4-201ENST00000446006 880 ntBASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 AL139010.1-201ENST00000454878 894 ntBASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 RARRES2P9-201ENST00000565168 469 ntBASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 AC087481.3-201ENST00000602886 1894 ntBASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.79■□□□□ 0.76
CHD1LQ86WJ1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 YBX1P5-201ENST00000509441 847 ntBASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHD1LQ86WJ1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 KRT8P37-201ENST00000451609 1420 ntBASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 FAM58DP-201ENST00000428076 619 ntBASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms