Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD2Q7Z408 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.23□□□□□ -0.29
CSMD2Q7Z408 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AC004899.1-201ENST00000424687 1714 ntBASIC13.23□□□□□ -0.29
CSMD2Q7Z408 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 RN7SL713P-201ENST00000582127 302 ntBASIC13.23□□□□□ -0.29
CSMD2Q7Z408 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.23□□□□□ -0.29
CSMD2Q7Z408 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 ACKR1-201ENST00000368121 1240 ntBASIC13.23□□□□□ -0.29
CSMD2Q7Z408 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 RPSAP31-201ENST00000416648 895 ntBASIC13.23□□□□□ -0.29
CSMD2Q7Z408 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.23□□□□□ -0.29
CSMD2Q7Z408 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 AC093813.1-201ENST00000605066 256 ntBASIC13.22□□□□□ -0.29
CSMD2Q7Z408 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.22□□□□□ -0.29
CSMD2Q7Z408 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD2Q7Z408 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms