Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 TSEN15P1-201ENST00000423257 515 ntBASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 AC023141.5-201ENST00000458585 616 ntBASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 KRT8P23-201ENST00000560090 1207 ntBASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 AC025678.2-201ENST00000562061 970 ntBASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 AC016027.1-202ENST00000607927 1699 ntBASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 AC022188.1-201ENST00000620960 1664 ntBASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 ADH5P3-201ENST00000433842 1137 ntBASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP1BQ7LBR1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP1BQ7LBR1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP1BQ7LBR1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP1BQ7LBR1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP1BQ7LBR1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP1BQ7LBR1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP1BQ7LBR1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP1BQ7LBR1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms