Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP45Q70EL2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP45Q70EL2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP45Q70EL2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
USP45Q70EL2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
USP45Q70EL2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.06■□□□□ 0.16
USP45Q70EL2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.06■□□□□ 0.16
USP45Q70EL2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 FLJ16779-201ENST00000612722 7638 ntBASIC16.06■□□□□ 0.16
USP45Q70EL2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.06■□□□□ 0.16
USP45Q70EL2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
USP45Q70EL2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.06■□□□□ 0.16
USP45Q70EL2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.06■□□□□ 0.16
USP45Q70EL2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.06■□□□□ 0.16
USP45Q70EL2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.06■□□□□ 0.16
USP45Q70EL2 AL033527.5-202ENST00000641632 1098 ntBASIC16.06■□□□□ 0.16
USP45Q70EL2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 DOC2GP-204ENST00000639052 2548 ntBASIC16.06■□□□□ 0.16
USP45Q70EL2 AC018695.7-201ENST00000624587 2492 ntBASIC16.06■□□□□ 0.16
USP45Q70EL2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
USP45Q70EL2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 LINC02447-202ENST00000501888 2146 ntBASIC16.06■□□□□ 0.16
USP45Q70EL2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.06■□□□□ 0.16
USP45Q70EL2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP45Q70EL2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 CDC14C-201ENST00000428251 1719 ntBASIC16.05■□□□□ 0.16
USP45Q70EL2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.05■□□□□ 0.16
USP45Q70EL2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.05■□□□□ 0.16
USP45Q70EL2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.05■□□□□ 0.16
USP45Q70EL2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.05■□□□□ 0.16
USP45Q70EL2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.05■□□□□ 0.16
USP45Q70EL2 INGX-202ENST00000489074 768 ntBASIC16.05■□□□□ 0.16
USP45Q70EL2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 REXO1L1P-202ENST00000608646 1974 ntBASIC16.05■□□□□ 0.16
USP45Q70EL2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
USP45Q70EL2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
USP45Q70EL2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.05■□□□□ 0.16
USP45Q70EL2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP45Q70EL2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
USP45Q70EL2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
USP45Q70EL2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms