Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 IGHV3-62-201ENST00000520057 340 ntBASIC18.07■□□□□ 0.48
SHC4Q6S5L8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.07■□□□□ 0.48
SHC4Q6S5L8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHC4Q6S5L8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 AP000347.1-202ENST00000435868 847 ntBASIC18.06■□□□□ 0.48
SHC4Q6S5L8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 AL592309.1-201ENST00000443127 649 ntBASIC18.06■□□□□ 0.48
SHC4Q6S5L8 EEF1DP4-201ENST00000446006 880 ntBASIC18.06■□□□□ 0.48
SHC4Q6S5L8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.06■□□□□ 0.48
SHC4Q6S5L8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 UXT-AS1-201ENST00000590504 1525 ntBASIC18.06■□□□□ 0.48
SHC4Q6S5L8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC4Q6S5L8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 MTDHP5-201ENST00000598980 586 ntBASIC18.05■□□□□ 0.48
SHC4Q6S5L8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 AC105339.1-204ENST00000636249 355 ntBASIC18.05■□□□□ 0.48
SHC4Q6S5L8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC4Q6S5L8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC4Q6S5L8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms