Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 MIR648-201ENST00000385046 94 ntBASIC19.01■□□□□ 0.63
CTR9Q6PD62 AC104794.3-201ENST00000566840 1248 ntBASIC19.01■□□□□ 0.63
CTR9Q6PD62 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTR9Q6PD62 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTR9Q6PD62 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19■□□□□ 0.63
CTR9Q6PD62 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19■□□□□ 0.63
CTR9Q6PD62 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTR9Q6PD62 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTR9Q6PD62 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19■□□□□ 0.63
CTR9Q6PD62 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19■□□□□ 0.63
CTR9Q6PD62 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
CTR9Q6PD62 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19■□□□□ 0.63
CTR9Q6PD62 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTR9Q6PD62 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19■□□□□ 0.63
CTR9Q6PD62 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.99■□□□□ 0.63
CTR9Q6PD62 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 AL589987.1-201ENST00000453380 819 ntBASIC18.99■□□□□ 0.63
CTR9Q6PD62 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 SRD5A3P1-201ENST00000603021 949 ntBASIC18.99■□□□□ 0.63
CTR9Q6PD62 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms