Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 TSSK5P-201ENST00000423978 907 ntBASIC16.61■□□□□ 0.25
TRNP1Q6NT89 PMS2P2-201ENST00000425039 1128 ntBASIC16.61■□□□□ 0.25
TRNP1Q6NT89 TARDBPP1-201ENST00000442013 1203 ntBASIC16.61■□□□□ 0.25
TRNP1Q6NT89 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 AC106028.4-201ENST00000614509 607 ntBASIC16.61■□□□□ 0.25
TRNP1Q6NT89 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 AC105250.1-201ENST00000509378 2057 ntBASIC16.61■□□□□ 0.25
TRNP1Q6NT89 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.61■□□□□ 0.25
TRNP1Q6NT89 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 MIR943-201ENST00000401286 94 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AC067863.1-201ENST00000494933 530 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 RFPL4AP1-201ENST00000530883 850 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AL158211.3-201ENST00000607385 239 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AL033527.5-202ENST00000641632 1098 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AC136621.1-201ENST00000624017 2304 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.6■□□□□ 0.25
TRNP1Q6NT89 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
TRNP1Q6NT89 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.59■□□□□ 0.25
TRNP1Q6NT89 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms