Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
LYSMD4Q5XG99 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD4Q5XG99 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD4Q5XG99 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD4Q5XG99 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.58■□□□□ 0.09
LYSMD4Q5XG99 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 ACKR1-201ENST00000368121 1240 ntBASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AC022137.2-201ENST00000503482 481 ntBASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AL118558.3-201ENST00000607414 1079 ntBASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 REXO1L1P-202ENST00000608646 1974 ntBASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AL121723.1-201ENST00000445194 1519 ntBASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD4Q5XG99 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 UBALD1-205ENST00000590891 2641 ntBASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 AC004945.1-201ENST00000416738 983 ntBASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 FAM86HP-204ENST00000513466 959 ntBASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 HNRNPUP1-201ENST00000554987 333 ntBASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 C2orf69P2-201ENST00000562032 1123 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms