Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 AC106760.1-201ENST00000508690 800 ntBASIC19.55■□□□□ 0.72
CCDC93Q567U6 AP001063.1-201ENST00000568332 529 ntBASIC19.55■□□□□ 0.72
CCDC93Q567U6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 PCDHB19P-201ENST00000570871 2371 ntBASIC19.55■□□□□ 0.72
CCDC93Q567U6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC93Q567U6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC93Q567U6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AL603756.1-201ENST00000606511 2163 ntBASIC19.54■□□□□ 0.72
CCDC93Q567U6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.54■□□□□ 0.72
CCDC93Q567U6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 VDAC1P7-201ENST00000462417 847 ntBASIC19.54■□□□□ 0.72
CCDC93Q567U6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AC008687.7-202ENST00000637404 953 ntBASIC19.54■□□□□ 0.72
CCDC93Q567U6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC93Q567U6 MSTO2P-201ENST00000314835 1709 ntBASIC19.54■□□□□ 0.72
CCDC93Q567U6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CCDC93Q567U6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC93Q567U6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
CCDC93Q567U6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC93Q567U6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC93Q567U6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
CCDC93Q567U6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC93Q567U6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC93Q567U6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC93Q567U6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC93Q567U6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC93Q567U6 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC93Q567U6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC93Q567U6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC93Q567U6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms