Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 CNN2P3-201ENST00000450201 906 ntBASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 AL079307.3-201ENST00000556114 283 ntBASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 MIR4313-201ENST00000580760 101 ntBASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 AL136317.3-201ENST00000618497 906 ntBASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN20Q4JDL3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN20Q4JDL3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN20Q4JDL3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 TUBB3P1-201ENST00000405796 1332 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 AL080243.2-201ENST00000418783 582 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 KRT18P28-201ENST00000453838 1332 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 PHKG1P2-201ENST00000457537 863 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 AC025678.2-201ENST00000562061 970 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 AC051619.7-201ENST00000568314 623 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 AL450472.2-201ENST00000603663 1156 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 GPALPP1-207ENST00000611650 899 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 AC092850.2-201ENST00000623821 2697 ntBASIC16.83■□□□□ 0.28
PTPN20Q4JDL3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 KRT8P12-202ENST00000472924 1397 ntBASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 AC125807.1-201ENST00000483097 614 ntBASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms