Protein–RNA interactions for Protein: Q4G0S4

CYP27C1, Cytochrome P450 27C1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP27C1Q4G0S4 AC126177.1-201ENST00000547829 2218 ntBASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 U82695.1-201ENST00000635752 1889 ntBASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 TFAMP1-201ENST00000412727 736 ntBASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 AC104640.1-201ENST00000562617 2109 ntBASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 MIR3687-2-201ENST00000577708 61 ntBASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 MIR3687-1-201ENST00000614492 61 ntBASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CYP27C1Q4G0S4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
CYP27C1Q4G0S4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 BX842568.4-201ENST00000421222 227 ntBASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 AC093724.1-201ENST00000448659 1027 ntBASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 AL592424.1-201ENST00000563624 1536 ntBASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.2■□□□□ 0.02
CYP27C1Q4G0S4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 AC073439.1-201ENST00000624121 1774 ntBASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYP27C1Q4G0S4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 331.4 ms