Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 REXO1L1P-202ENST00000608646 1974 ntBASIC13.91□□□□□ -0.18
FAM27E3Q08E93 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 TTTY23B-201ENST00000442790 549 ntBASIC13.91□□□□□ -0.18
FAM27E3Q08E93 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 PHKG1P2-201ENST00000457537 863 ntBASIC13.91□□□□□ -0.18
FAM27E3Q08E93 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 AC092552.1-201ENST00000547243 906 ntBASIC13.91□□□□□ -0.18
FAM27E3Q08E93 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 AC092364.2-201ENST00000596710 2692 ntBASIC13.91□□□□□ -0.18
FAM27E3Q08E93 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 AL662844.4-201ENST00000606367 2838 ntBASIC13.91□□□□□ -0.18
FAM27E3Q08E93 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
FAM27E3Q08E93 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AL162274.1-201ENST00000617191 1098 ntBASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AL158212.4-201ENST00000624062 1286 ntBASIC13.9□□□□□ -0.18
FAM27E3Q08E93 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.9□□□□□ -0.18
FAM27E3Q08E93 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
FAM27E3Q08E93 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
FAM27E3Q08E93 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
FAM27E3Q08E93 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms