Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CX3CL1P78423 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CX3CL1P78423 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CL1P78423 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.99□□□□□ -0.33
CX3CL1P78423 GPX1P2-201ENST00000429271 606 ntBASIC12.99□□□□□ -0.33
CX3CL1P78423 TIMM8BP1-201ENST00000452384 211 ntBASIC12.99□□□□□ -0.33
CX3CL1P78423 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.99□□□□□ -0.33
CX3CL1P78423 AC112482.1-201ENST00000492080 688 ntBASIC12.99□□□□□ -0.33
CX3CL1P78423 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CX3CL1P78423 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 AC092865.5-201ENST00000545435 363 ntBASIC12.99□□□□□ -0.33
CX3CL1P78423 AC243562.1-201ENST00000560672 389 ntBASIC12.99□□□□□ -0.33
CX3CL1P78423 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CL1P78423 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CL1P78423 AC010327.4-202ENST00000591484 748 ntBASIC12.99□□□□□ -0.33
CX3CL1P78423 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
CX3CL1P78423 AC008267.7-201ENST00000624570 1194 ntBASIC12.99□□□□□ -0.33
CX3CL1P78423 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CL1P78423 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CX3CL1P78423 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CL1P78423 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 RPSAP43-201ENST00000402237 625 ntBASIC12.98□□□□□ -0.33
CX3CL1P78423 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.98□□□□□ -0.33
CX3CL1P78423 UPF3AP3-201ENST00000420996 769 ntBASIC12.98□□□□□ -0.33
CX3CL1P78423 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 AC079140.1-201ENST00000508039 487 ntBASIC12.98□□□□□ -0.33
CX3CL1P78423 KRT8P48-201ENST00000515599 1220 ntBASIC12.98□□□□□ -0.33
CX3CL1P78423 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.98□□□□□ -0.33
CX3CL1P78423 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.98□□□□□ -0.33
CX3CL1P78423 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.98□□□□□ -0.33
CX3CL1P78423 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 MIR4469-201ENST00000583919 79 ntBASIC12.98□□□□□ -0.33
CX3CL1P78423 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 AC027307.2-201ENST00000591252 911 ntBASIC12.98□□□□□ -0.33
CX3CL1P78423 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CX3CL1P78423 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CL1P78423 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CL1P78423 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms