Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VBP1P61758 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.45□□□□□ -0.1
VBP1P61758 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
VBP1P61758 AC148477.4-201ENST00000613430 1793 ntBASIC14.45□□□□□ -0.1
VBP1P61758 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VBP1P61758 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VBP1P61758 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 PMPCAP1-201ENST00000508114 1576 ntBASIC14.44□□□□□ -0.1
VBP1P61758 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.44□□□□□ -0.1
VBP1P61758 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.44□□□□□ -0.1
VBP1P61758 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 AC098590.1-201ENST00000468126 897 ntBASIC14.44□□□□□ -0.1
VBP1P61758 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.44□□□□□ -0.1
VBP1P61758 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.44□□□□□ -0.1
VBP1P61758 AC009533.2-201ENST00000543664 586 ntBASIC14.44□□□□□ -0.1
VBP1P61758 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.44□□□□□ -0.1
VBP1P61758 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VBP1P61758 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.44□□□□□ -0.1
VBP1P61758 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.44□□□□□ -0.1
VBP1P61758 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
VBP1P61758 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VBP1P61758 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VBP1P61758 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.43□□□□□ -0.1
VBP1P61758 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.43□□□□□ -0.1
VBP1P61758 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.43□□□□□ -0.1
VBP1P61758 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 VENTXP5-201ENST00000523979 775 ntBASIC14.43□□□□□ -0.1
VBP1P61758 AC011840.4-201ENST00000578471 627 ntBASIC14.43□□□□□ -0.1
VBP1P61758 CYP2A7P1-201ENST00000595391 815 ntBASIC14.43□□□□□ -0.1
VBP1P61758 AL592071.1-201ENST00000611956 408 ntBASIC14.43□□□□□ -0.1
VBP1P61758 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
VBP1P61758 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VBP1P61758 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VBP1P61758 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
VBP1P61758 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.43□□□□□ -0.1
VBP1P61758 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.43□□□□□ -0.1
VBP1P61758 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.43□□□□□ -0.1
VBP1P61758 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.43□□□□□ -0.1
VBP1P61758 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VBP1P61758 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms