Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 BX842568.4-201ENST00000421222 227 ntBASIC14.38□□□□□ -0.11
CLRN1P58418 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.38□□□□□ -0.11
CLRN1P58418 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.38□□□□□ -0.11
CLRN1P58418 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.38□□□□□ -0.11
CLRN1P58418 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.38□□□□□ -0.11
CLRN1P58418 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLRN1P58418 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CLRN1P58418 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 AL365209.1-201ENST00000624418 6473 ntBASIC14.38□□□□□ -0.11
CLRN1P58418 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.37□□□□□ -0.11
CLRN1P58418 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 HLA-H-201ENST00000383620 1096 ntBASIC14.37□□□□□ -0.11
CLRN1P58418 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 AC142381.1-201ENST00000426099 345 ntBASIC14.37□□□□□ -0.11
CLRN1P58418 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.37□□□□□ -0.11
CLRN1P58418 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.37□□□□□ -0.11
CLRN1P58418 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.37□□□□□ -0.11
CLRN1P58418 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.37□□□□□ -0.11
CLRN1P58418 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 AC010327.4-202ENST00000591484 748 ntBASIC14.37□□□□□ -0.11
CLRN1P58418 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLRN1P58418 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.37□□□□□ -0.11
CLRN1P58418 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 AC008677.1-201ENST00000519230 1561 ntBASIC14.37□□□□□ -0.11
CLRN1P58418 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.37□□□□□ -0.11
CLRN1P58418 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.37□□□□□ -0.11
CLRN1P58418 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.37□□□□□ -0.11
CLRN1P58418 AP001282.1-201ENST00000531301 1499 ntBASIC14.37□□□□□ -0.11
CLRN1P58418 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.37□□□□□ -0.11
CLRN1P58418 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.37□□□□□ -0.11
CLRN1P58418 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLRN1P58418 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.36□□□□□ -0.11
CLRN1P58418 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.36□□□□□ -0.11
CLRN1P58418 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 FOXO1B-201ENST00000504678 1527 ntBASIC14.36□□□□□ -0.11
CLRN1P58418 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.36□□□□□ -0.11
CLRN1P58418 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CLRN1P58418 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLRN1P58418 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.36□□□□□ -0.11
CLRN1P58418 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms