Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S2P56377 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S2P56377 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP1S2P56377 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP1S2P56377 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.63■□□□□ 0.09
AP1S2P56377 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S2P56377 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S2P56377 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S2P56377 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S2P56377 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
AP1S2P56377 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP1S2P56377 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
AP1S2P56377 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S2P56377 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 CNN2P11-201ENST00000429351 262 ntBASIC15.62■□□□□ 0.09
AP1S2P56377 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S2P56377 AC004967.1-201ENST00000453589 447 ntBASIC15.62■□□□□ 0.09
AP1S2P56377 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S2P56377 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.62■□□□□ 0.09
AP1S2P56377 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.62■□□□□ 0.09
AP1S2P56377 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP1S2P56377 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP1S2P56377 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP1S2P56377 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S2P56377 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP1S2P56377 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
AP1S2P56377 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S2P56377 REXO1L1P-202ENST00000608646 1974 ntBASIC15.62■□□□□ 0.09
AP1S2P56377 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP1S2P56377 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
AP1S2P56377 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S2P56377 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
AP1S2P56377 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
AP1S2P56377 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S2P56377 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
AP1S2P56377 SPDYE14P-201ENST00000442619 822 ntBASIC15.61■□□□□ 0.09
AP1S2P56377 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.61■□□□□ 0.09
AP1S2P56377 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.61■□□□□ 0.09
AP1S2P56377 AC026150.2-201ENST00000564693 1156 ntBASIC15.61■□□□□ 0.09
AP1S2P56377 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.61■□□□□ 0.09
AP1S2P56377 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
AP1S2P56377 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 AP001059.3-201ENST00000619053 235 ntBASIC15.61■□□□□ 0.09
AP1S2P56377 AC134684.3-201ENST00000641758 218 ntBASIC15.61■□□□□ 0.09
AP1S2P56377 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
AP1S2P56377 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S2P56377 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S2P56377 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S2P56377 KRT8P37-201ENST00000451609 1420 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms