Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH11P55287 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 AC016027.1-202ENST00000607927 1699 ntBASIC14.77□□□□□ -0.04
CDH11P55287 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH11P55287 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH11P55287 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
CDH11P55287 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH11P55287 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH11P55287 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH11P55287 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CDH11P55287 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH11P55287 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH11P55287 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 HCG4-201ENST00000418983 998 ntBASIC14.77□□□□□ -0.05
CDH11P55287 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH11P55287 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH11P55287 AC107918.2-201ENST00000530817 355 ntBASIC14.77□□□□□ -0.05
CDH11P55287 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH11P55287 KRT19P2-202ENST00000557173 1012 ntBASIC14.77□□□□□ -0.05
CDH11P55287 AC005412.3-201ENST00000580309 715 ntBASIC14.77□□□□□ -0.05
CDH11P55287 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH11P55287 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.77□□□□□ -0.05
CDH11P55287 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH11P55287 AC007064.4-201ENST00000637740 555 ntBASIC14.77□□□□□ -0.05
CDH11P55287 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDH11P55287 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH11P55287 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CDH11P55287 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH11P55287 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH11P55287 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH11P55287 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH11P55287 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH11P55287 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH11P55287 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
CDH11P55287 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
CDH11P55287 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH11P55287 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 AC005622.1-201ENST00000636801 1703 ntBASIC14.76□□□□□ -0.05
CDH11P55287 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 CXCL1P1-201ENST00000502804 216 ntBASIC14.76□□□□□ -0.05
CDH11P55287 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.76□□□□□ -0.05
CDH11P55287 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.76□□□□□ -0.05
CDH11P55287 MIR4469-201ENST00000583919 79 ntBASIC14.76□□□□□ -0.05
CDH11P55287 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 AC023141.13-201ENST00000604991 943 ntBASIC14.76□□□□□ -0.05
CDH11P55287 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CDH11P55287 C20orf181-201ENST00000623918 480 ntBASIC14.76□□□□□ -0.05
CDH11P55287 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 AC006058.4-201ENST00000624016 1670 ntBASIC14.76□□□□□ -0.05
CDH11P55287 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.76□□□□□ -0.05
CDH11P55287 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDH11P55287 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms