Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.31■□□□□ 0.04
NR1H2P55055 AC105339.3-201ENST00000560043 636 ntBASIC15.31■□□□□ 0.04
NR1H2P55055 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.31■□□□□ 0.04
NR1H2P55055 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.31■□□□□ 0.04
NR1H2P55055 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR1H2P55055 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NR1H2P55055 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 COX5BP2-201ENST00000392354 334 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 MIR1233-2-201ENST00000408138 82 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 MIR1233-1-201ENST00000408722 82 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 AC092910.1-201ENST00000482027 1129 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 PMPCAP1-201ENST00000508114 1576 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 IGHV3-22-201ENST00000520721 359 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NR1H2P55055 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.3■□□□□ 0.04
NR1H2P55055 AC006557.2-201ENST00000592985 1240 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 AC027601.4-201ENST00000611259 610 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NR1H2P55055 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NR1H2P55055 MIR1199-201ENST00000621445 119 ntBASIC15.3■□□□□ 0.04
NR1H2P55055 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NR1H2P55055 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
NR1H2P55055 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H2P55055 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 AC104109.2-201ENST00000602919 1418 ntBASIC15.29■□□□□ 0.04
NR1H2P55055 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NR1H2P55055 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.29■□□□□ 0.04
NR1H2P55055 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NR1H2P55055 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.29■□□□□ 0.04
NR1H2P55055 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.29■□□□□ 0.04
NR1H2P55055 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.29■□□□□ 0.04
NR1H2P55055 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms