Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN5P54829 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN5P54829 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN5P54829 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN5P54829 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN5P54829 AC104596.2-201ENST00000512793 793 ntBASIC16.55■□□□□ 0.24
PTPN5P54829 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN5P54829 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN5P54829 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN5P54829 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 AL022328.1-201ENST00000610050 478 ntBASIC16.55■□□□□ 0.24
PTPN5P54829 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN5P54829 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 AC008894.3-201ENST00000624324 3103 ntBASIC16.55■□□□□ 0.24
PTPN5P54829 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN5P54829 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN5P54829 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN5P54829 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
PTPN5P54829 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
PTPN5P54829 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 ZNF767P-206ENST00000513792 565 ntBASIC16.54■□□□□ 0.24
PTPN5P54829 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN5P54829 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.54■□□□□ 0.24
PTPN5P54829 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN5P54829 C2orf69P2-201ENST00000562032 1123 ntBASIC16.54■□□□□ 0.24
PTPN5P54829 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN5P54829 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN5P54829 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN5P54829 U62317.3-201ENST00000608319 855 ntBASIC16.54■□□□□ 0.24
PTPN5P54829 AC004461.2-201ENST00000629517 803 ntBASIC16.54■□□□□ 0.24
PTPN5P54829 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN5P54829 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPN5P54829 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN5P54829 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN5P54829 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN5P54829 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN5P54829 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN5P54829 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN5P54829 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN5P54829 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN5P54829 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN5P54829 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PTPN5P54829 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms