Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.17■□□□□ 0.02
KNTC1P50748 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.17■□□□□ 0.02
KNTC1P50748 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 AP001063.1-201ENST00000568332 529 ntBASIC15.17■□□□□ 0.02
KNTC1P50748 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
KNTC1P50748 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.17■□□□□ 0.02
KNTC1P50748 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.17■□□□□ 0.02
KNTC1P50748 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.17■□□□□ 0.02
KNTC1P50748 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KNTC1P50748 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.16■□□□□ 0.02
KNTC1P50748 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 AC026954.1-201ENST00000429771 1293 ntBASIC15.16■□□□□ 0.02
KNTC1P50748 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 AC104306.2-201ENST00000451877 341 ntBASIC15.16■□□□□ 0.02
KNTC1P50748 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.16■□□□□ 0.02
KNTC1P50748 AP001889.1-201ENST00000525414 633 ntBASIC15.16■□□□□ 0.02
KNTC1P50748 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.16■□□□□ 0.02
KNTC1P50748 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.16■□□□□ 0.02
KNTC1P50748 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.16■□□□□ 0.02
KNTC1P50748 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.16■□□□□ 0.02
KNTC1P50748 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
KNTC1P50748 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KNTC1P50748 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KNTC1P50748 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.16■□□□□ 0.02
KNTC1P50748 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KNTC1P50748 AL391256.1-201ENST00000443260 1855 ntBASIC15.15■□□□□ 0.02
KNTC1P50748 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms