Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNNI2P48788 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
TNNI2P48788 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.95■□□□□ 0.62
TNNI2P48788 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TNNI2P48788 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNI2P48788 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.95■□□□□ 0.62
TNNI2P48788 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.95■□□□□ 0.62
TNNI2P48788 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.95■□□□□ 0.62
TNNI2P48788 TARDBPP1-201ENST00000442013 1203 ntBASIC18.95■□□□□ 0.62
TNNI2P48788 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TNNI2P48788 CTBP2P5-201ENST00000454986 1264 ntBASIC18.95■□□□□ 0.62
TNNI2P48788 RPL13AP25-201ENST00000484130 612 ntBASIC18.95■□□□□ 0.62
TNNI2P48788 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.95■□□□□ 0.62
TNNI2P48788 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNI2P48788 BRI3BPP1-201ENST00000594224 787 ntBASIC18.95■□□□□ 0.62
TNNI2P48788 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNI2P48788 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
TNNI2P48788 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.95■□□□□ 0.62
TNNI2P48788 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNI2P48788 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNI2P48788 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNNI2P48788 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNNI2P48788 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TNNI2P48788 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TNNI2P48788 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.94■□□□□ 0.62
TNNI2P48788 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TNNI2P48788 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TNNI2P48788 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 PRORSD1P-202ENST00000563365 2154 ntBASIC18.94■□□□□ 0.62
TNNI2P48788 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 FAM86MP-201ENST00000340703 885 ntBASIC18.94■□□□□ 0.62
TNNI2P48788 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TNNI2P48788 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.94■□□□□ 0.62
TNNI2P48788 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 ENPP7P5-201ENST00000541031 1031 ntBASIC18.94■□□□□ 0.62
TNNI2P48788 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.94■□□□□ 0.62
TNNI2P48788 MIR4525-201ENST00000580000 75 ntBASIC18.94■□□□□ 0.62
TNNI2P48788 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.94■□□□□ 0.62
TNNI2P48788 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.94■□□□□ 0.62
TNNI2P48788 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNNI2P48788 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.94■□□□□ 0.62
TNNI2P48788 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 PDIA3P1-201ENST00000471856 1510 ntBASIC18.94■□□□□ 0.62
TNNI2P48788 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TNNI2P48788 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TNNI2P48788 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TNNI2P48788 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TNNI2P48788 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TNNI2P48788 AC134915.1-201ENST00000426461 574 ntBASIC18.93■□□□□ 0.62
TNNI2P48788 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.93■□□□□ 0.62
TNNI2P48788 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TNNI2P48788 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.93■□□□□ 0.62
TNNI2P48788 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.93■□□□□ 0.62
TNNI2P48788 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.93■□□□□ 0.62
TNNI2P48788 AL359711.2-201ENST00000563105 872 ntBASIC18.93■□□□□ 0.62
TNNI2P48788 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.93■□□□□ 0.62
TNNI2P48788 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.93■□□□□ 0.62
TNNI2P48788 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.93■□□□□ 0.62
TNNI2P48788 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.93■□□□□ 0.62
TNNI2P48788 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.93■□□□□ 0.62
TNNI2P48788 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.93■□□□□ 0.62
TNNI2P48788 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNNI2P48788 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.93■□□□□ 0.62
TNNI2P48788 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNNI2P48788 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms