Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HADHAP40939 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.28■□□□□ 0.2
HADHAP40939 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HADHAP40939 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HADHAP40939 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.27■□□□□ 0.2
HADHAP40939 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.27■□□□□ 0.2
HADHAP40939 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HADHAP40939 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.27■□□□□ 0.2
HADHAP40939 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.27■□□□□ 0.2
HADHAP40939 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.27■□□□□ 0.2
HADHAP40939 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 AP000344.2-201ENST00000512987 629 ntBASIC16.27■□□□□ 0.2
HADHAP40939 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.27■□□□□ 0.2
HADHAP40939 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHAP40939 AC022145.2-201ENST00000598203 171 ntBASIC16.27■□□□□ 0.2
HADHAP40939 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHAP40939 AC084121.4-201ENST00000641598 221 ntBASIC16.27■□□□□ 0.2
HADHAP40939 AF228730.8-201ENST00000642140 221 ntBASIC16.27■□□□□ 0.2
HADHAP40939 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHAP40939 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.27■□□□□ 0.19
HADHAP40939 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
HADHAP40939 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HADHAP40939 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHAP40939 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.27■□□□□ 0.19
HADHAP40939 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
HADHAP40939 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HADHAP40939 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HADHAP40939 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHAP40939 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HADHAP40939 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HADHAP40939 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHAP40939 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 UXT-AS1-201ENST00000590504 1525 ntBASIC16.26■□□□□ 0.19
HADHAP40939 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HADHAP40939 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 HAUS4P1-201ENST00000406739 1145 ntBASIC16.26■□□□□ 0.19
HADHAP40939 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHAP40939 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.26■□□□□ 0.19
HADHAP40939 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.26■□□□□ 0.19
HADHAP40939 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.26■□□□□ 0.19
HADHAP40939 AL691403.2-201ENST00000618460 490 ntBASIC16.26■□□□□ 0.19
HADHAP40939 AC055717.3-201ENST00000622967 595 ntBASIC16.26■□□□□ 0.19
HADHAP40939 AL513210.1-201ENST00000629608 234 ntBASIC16.26■□□□□ 0.19
HADHAP40939 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HADHAP40939 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HADHAP40939 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHAP40939 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHAP40939 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HADHAP40939 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.26■□□□□ 0.19
HADHAP40939 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
HADHAP40939 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHAP40939 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms