Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.73□□□□□ -0.05
RFC3P40938 GNAQP1-201ENST00000444815 1067 ntBASIC14.73□□□□□ -0.05
RFC3P40938 CRB3P1-201ENST00000449338 276 ntBASIC14.73□□□□□ -0.05
RFC3P40938 RN7SL618P-201ENST00000477850 296 ntBASIC14.73□□□□□ -0.05
RFC3P40938 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.73□□□□□ -0.05
RFC3P40938 AP005018.1-201ENST00000525475 301 ntBASIC14.73□□□□□ -0.05
RFC3P40938 AC135586.1-201ENST00000539323 574 ntBASIC14.73□□□□□ -0.05
RFC3P40938 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.73□□□□□ -0.05
RFC3P40938 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.73□□□□□ -0.05
RFC3P40938 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFC3P40938 AC012645.4-201ENST00000610691 1061 ntBASIC14.73□□□□□ -0.05
RFC3P40938 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 AL035252.4-201ENST00000624174 288 ntBASIC14.73□□□□□ -0.05
RFC3P40938 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.73□□□□□ -0.05
RFC3P40938 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.73□□□□□ -0.05
RFC3P40938 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.73□□□□□ -0.05
RFC3P40938 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.72□□□□□ -0.05
RFC3P40938 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.72□□□□□ -0.05
RFC3P40938 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
RFC3P40938 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.72□□□□□ -0.05
RFC3P40938 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RFC3P40938 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RFC3P40938 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.72□□□□□ -0.05
RFC3P40938 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 SPTLC1P1-201ENST00000447199 261 ntBASIC14.72□□□□□ -0.05
RFC3P40938 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.72□□□□□ -0.05
RFC3P40938 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.72□□□□□ -0.05
RFC3P40938 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 AC044860.1-202ENST00000559481 777 ntBASIC14.72□□□□□ -0.05
RFC3P40938 AC104794.3-201ENST00000566840 1248 ntBASIC14.72□□□□□ -0.05
RFC3P40938 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.72□□□□□ -0.05
RFC3P40938 AC026979.3-201ENST00000607315 403 ntBASIC14.72□□□□□ -0.05
RFC3P40938 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFC3P40938 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFC3P40938 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.71□□□□□ -0.05
RFC3P40938 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RFC3P40938 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.71□□□□□ -0.05
RFC3P40938 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RFC3P40938 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.71□□□□□ -0.05
RFC3P40938 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFC3P40938 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.71□□□□□ -0.05
RFC3P40938 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RFC3P40938 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.71□□□□□ -0.05
RFC3P40938 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFC3P40938 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms