Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.09■□□□□ 0.81
COL15A1P39059 AC000095.1-201ENST00000603208 874 ntBASIC20.09■□□□□ 0.81
COL15A1P39059 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.09■□□□□ 0.81
COL15A1P39059 AC009542.2-202ENST00000619004 1067 ntBASIC20.09■□□□□ 0.81
COL15A1P39059 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COL15A1P39059 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL15A1P39059 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.09■□□□□ 0.81
COL15A1P39059 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 AC134407.2-201ENST00000625089 1978 ntBASIC20.09■□□□□ 0.81
COL15A1P39059 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
COL15A1P39059 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL15A1P39059 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.08■□□□□ 0.81
COL15A1P39059 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.08■□□□□ 0.81
COL15A1P39059 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.08■□□□□ 0.81
COL15A1P39059 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.08■□□□□ 0.81
COL15A1P39059 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.08■□□□□ 0.81
COL15A1P39059 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL15A1P39059 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.08■□□□□ 0.81
COL15A1P39059 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.08■□□□□ 0.81
COL15A1P39059 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.08■□□□□ 0.81
COL15A1P39059 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL15A1P39059 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
COL15A1P39059 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL15A1P39059 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.08■□□□□ 0.81
COL15A1P39059 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL15A1P39059 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL15A1P39059 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL15A1P39059 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.08■□□□□ 0.81
COL15A1P39059 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL15A1P39059 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL15A1P39059 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL15A1P39059 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.08■□□□□ 0.8
COL15A1P39059 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL15A1P39059 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL15A1P39059 AC134312.5-201ENST00000568031 1313 ntBASIC20.08■□□□□ 0.8
COL15A1P39059 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
COL15A1P39059 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.08■□□□□ 0.8
COL15A1P39059 HAUS4P1-201ENST00000406739 1145 ntBASIC20.08■□□□□ 0.8
COL15A1P39059 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.08■□□□□ 0.8
COL15A1P39059 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.08■□□□□ 0.8
COL15A1P39059 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.08■□□□□ 0.8
COL15A1P39059 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.08■□□□□ 0.8
COL15A1P39059 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL15A1P39059 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
COL15A1P39059 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.08■□□□□ 0.8
COL15A1P39059 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.08■□□□□ 0.8
COL15A1P39059 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.08■□□□□ 0.8
COL15A1P39059 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
COL15A1P39059 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.07■□□□□ 0.8
COL15A1P39059 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COL15A1P39059 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.07■□□□□ 0.8
COL15A1P39059 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 YBX1P6-201ENST00000442962 1002 ntBASIC20.07■□□□□ 0.8
COL15A1P39059 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 PHKG1P2-201ENST00000457537 863 ntBASIC20.07■□□□□ 0.8
COL15A1P39059 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.07■□□□□ 0.8
COL15A1P39059 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.07■□□□□ 0.8
COL15A1P39059 AP001063.1-201ENST00000568332 529 ntBASIC20.07■□□□□ 0.8
COL15A1P39059 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COL15A1P39059 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.07■□□□□ 0.8
COL15A1P39059 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL15A1P39059 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.07■□□□□ 0.8
COL15A1P39059 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COL15A1P39059 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms