Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
RFC1P35251 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFC1P35251 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFC1P35251 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.94■□□□□ 0.3
RFC1P35251 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
RFC1P35251 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
RFC1P35251 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.94■□□□□ 0.3
RFC1P35251 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.94■□□□□ 0.3
RFC1P35251 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RFC1P35251 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.94■□□□□ 0.3
RFC1P35251 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.94■□□□□ 0.3
RFC1P35251 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC1P35251 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC1P35251 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.94■□□□□ 0.3
RFC1P35251 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.93■□□□□ 0.3
RFC1P35251 AC211486.1-202ENST00000416371 468 ntBASIC16.93■□□□□ 0.3
RFC1P35251 AL627223.1-201ENST00000416693 442 ntBASIC16.93■□□□□ 0.3
RFC1P35251 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.93■□□□□ 0.3
RFC1P35251 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 AC211476.1-201ENST00000503899 468 ntBASIC16.93■□□□□ 0.3
RFC1P35251 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.93■□□□□ 0.3
RFC1P35251 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.93■□□□□ 0.3
RFC1P35251 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 AL691432.1-201ENST00000596308 1422 ntBASIC16.93■□□□□ 0.3
RFC1P35251 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFC1P35251 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RFC1P35251 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFC1P35251 AP001282.1-201ENST00000531301 1499 ntBASIC16.93■□□□□ 0.3
RFC1P35251 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.92■□□□□ 0.3
RFC1P35251 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RFC1P35251 AC011477.6-201ENST00000604980 1927 ntBASIC16.92■□□□□ 0.3
RFC1P35251 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.92■□□□□ 0.3
RFC1P35251 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 AP000344.2-201ENST00000512987 629 ntBASIC16.92■□□□□ 0.3
RFC1P35251 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.92■□□□□ 0.3
RFC1P35251 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.92■□□□□ 0.3
RFC1P35251 RARRES2P9-201ENST00000565168 469 ntBASIC16.92■□□□□ 0.3
RFC1P35251 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms