Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
CASQ1P31415 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CASQ1P31415 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 AC133561.5-201ENST00000635547 218 ntBASIC17.3■□□□□ 0.36
CASQ1P31415 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 AL022326.1-202ENST00000641533 845 ntBASIC17.3■□□□□ 0.36
CASQ1P31415 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CASQ1P31415 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.29■□□□□ 0.36
CASQ1P31415 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.29■□□□□ 0.36
CASQ1P31415 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CASQ1P31415 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CASQ1P31415 IGHV3-47-201ENST00000425060 335 ntBASIC17.29■□□□□ 0.36
CASQ1P31415 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.29■□□□□ 0.36
CASQ1P31415 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.29■□□□□ 0.36
CASQ1P31415 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.29■□□□□ 0.36
CASQ1P31415 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.29■□□□□ 0.36
CASQ1P31415 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CASQ1P31415 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CASQ1P31415 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASQ1P31415 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CASQ1P31415 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CASQ1P31415 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.28■□□□□ 0.36
CASQ1P31415 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 AC107918.2-201ENST00000530817 355 ntBASIC17.28■□□□□ 0.36
CASQ1P31415 AC005412.3-201ENST00000580309 715 ntBASIC17.28■□□□□ 0.36
CASQ1P31415 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CASQ1P31415 AL589182.2-201ENST00000619332 1049 ntBASIC17.28■□□□□ 0.36
CASQ1P31415 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.28■□□□□ 0.36
CASQ1P31415 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CASQ1P31415 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CASQ1P31415 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CASQ1P31415 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CASQ1P31415 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASQ1P31415 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms