Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 AC134407.2-201ENST00000625089 1978 ntBASIC15.24■□□□□ 0.03
PTPN6P29350 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN6P29350 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 AC090616.6-203ENST00000579186 1945 ntBASIC15.24■□□□□ 0.03
PTPN6P29350 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
PTPN6P29350 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 AP006288.1-201ENST00000446065 395 ntBASIC15.24■□□□□ 0.03
PTPN6P29350 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN6P29350 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
PTPN6P29350 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN6P29350 AC099522.2-201ENST00000607001 744 ntBASIC15.24■□□□□ 0.03
PTPN6P29350 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN6P29350 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN6P29350 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTPN6P29350 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTPN6P29350 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN6P29350 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.23■□□□□ 0.03
PTPN6P29350 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.23■□□□□ 0.03
PTPN6P29350 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.23■□□□□ 0.03
PTPN6P29350 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.23■□□□□ 0.03
PTPN6P29350 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.23■□□□□ 0.03
PTPN6P29350 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PTPN6P29350 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PTPN6P29350 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PTPN6P29350 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PTPN6P29350 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PTPN6P29350 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN6P29350 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PTPN6P29350 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN6P29350 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.23■□□□□ 0.03
PTPN6P29350 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.22■□□□□ 0.03
PTPN6P29350 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN6P29350 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN6P29350 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PTPN6P29350 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms