Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 AC025580.3-201ENST00000617932 1424 ntBASIC20.22■□□□□ 0.83
PDE4AP27815 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDE4AP27815 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PDE4AP27815 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.22■□□□□ 0.83
PDE4AP27815 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.22■□□□□ 0.83
PDE4AP27815 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDE4AP27815 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.22■□□□□ 0.83
PDE4AP27815 AC145285.3-201ENST00000564603 959 ntBASIC20.22■□□□□ 0.83
PDE4AP27815 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.22■□□□□ 0.83
PDE4AP27815 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PDE4AP27815 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PDE4AP27815 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.22■□□□□ 0.83
PDE4AP27815 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.22■□□□□ 0.83
PDE4AP27815 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE4AP27815 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 AC104109.2-201ENST00000602919 1418 ntBASIC20.21■□□□□ 0.83
PDE4AP27815 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE4AP27815 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE4AP27815 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE4AP27815 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.21■□□□□ 0.83
PDE4AP27815 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDE4AP27815 AC004877.2-201ENST00000623941 599 ntBASIC20.21■□□□□ 0.83
PDE4AP27815 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE4AP27815 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PDE4AP27815 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE4AP27815 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
PDE4AP27815 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
PDE4AP27815 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE4AP27815 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PDE4AP27815 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE4AP27815 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.2■□□□□ 0.82
PDE4AP27815 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 AC079776.4-201ENST00000511039 504 ntBASIC20.2■□□□□ 0.82
PDE4AP27815 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE4AP27815 AC064836.3-201ENST00000607928 673 ntBASIC20.2■□□□□ 0.82
PDE4AP27815 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE4AP27815 AL078644.1-201ENST00000609881 752 ntBASIC20.2■□□□□ 0.82
PDE4AP27815 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE4AP27815 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE4AP27815 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE4AP27815 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDE4AP27815 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 U82695.1-201ENST00000635752 1889 ntBASIC20.2■□□□□ 0.82
PDE4AP27815 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE4AP27815 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE4AP27815 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE4AP27815 AC090616.6-203ENST00000579186 1945 ntBASIC20.19■□□□□ 0.82
PDE4AP27815 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.19■□□□□ 0.82
PDE4AP27815 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PDE4AP27815 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE4AP27815 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms