Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CHMP24386 CNN2P11-201ENST00000429351 262 ntBASIC15.06■□□□□ 0
CHMP24386 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.06■□□□□ 0
CHMP24386 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CHMP24386 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.06■□□□□ 0
CHMP24386 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.06■□□□□ 0
CHMP24386 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.06■□□□□ 0
CHMP24386 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CHMP24386 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.06■□□□□ 0
CHMP24386 AC105339.1-204ENST00000636249 355 ntBASIC15.06■□□□□ 0
CHMP24386 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.06■□□□□ 0
CHMP24386 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.06■□□□□ 0
CHMP24386 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CHMP24386 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CHMP24386 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.06■□□□□ 0
CHMP24386 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.06■□□□□ 0
CHMP24386 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.06■□□□□ 0
CHMP24386 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.06■□□□□ 0
CHMP24386 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP24386 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.06■□□□□ 0
CHMP24386 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.05■□□□□ 0
CHMP24386 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.05■□□□□ 0
CHMP24386 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.05■□□□□ 0
CHMP24386 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CHMP24386 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.05■□□□□ 0
CHMP24386 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP24386 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP24386 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP24386 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP24386 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.05■□□□□ -0
CHMP24386 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 MIR648-201ENST00000385046 94 ntBASIC15.05■□□□□ -0
CHMP24386 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.05■□□□□ -0
CHMP24386 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 TFAMP1-201ENST00000412727 736 ntBASIC15.05■□□□□ -0
CHMP24386 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.05■□□□□ -0
CHMP24386 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 SPDYE11-202ENST00000450699 704 ntBASIC15.05■□□□□ -0
CHMP24386 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.05■□□□□ -0
CHMP24386 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.05■□□□□ -0
CHMP24386 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.05■□□□□ -0
CHMP24386 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.05■□□□□ -0
CHMP24386 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.05■□□□□ -0
CHMP24386 SPDYE9P-201ENST00000570642 692 ntBASIC15.05■□□□□ -0
CHMP24386 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CHMP24386 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.05■□□□□ -0
CHMP24386 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 AL596442.2-201ENST00000610240 980 ntBASIC15.05■□□□□ -0
CHMP24386 SPDYE10P-202ENST00000612005 668 ntBASIC15.05■□□□□ -0
CHMP24386 SPDYE8P-202ENST00000612377 668 ntBASIC15.05■□□□□ -0
CHMP24386 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 AL513210.1-201ENST00000629608 234 ntBASIC15.05■□□□□ -0
CHMP24386 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
CHMP24386 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.05■□□□□ -0
CHMP24386 WASH6P-202ENST00000359512 1437 ntBASIC15.05■□□□□ -0
CHMP24386 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CHMP24386 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHMP24386 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHMP24386 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHMP24386 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP24386 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
CHMP24386 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CHMP24386 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CHMP24386 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CHMP24386 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.04■□□□□ -0
CHMP24386 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CHMP24386 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.04■□□□□ -0
CHMP24386 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 AC016027.1-202ENST00000607927 1699 ntBASIC15.04■□□□□ -0
CHMP24386 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.04■□□□□ -0
CHMP24386 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.04■□□□□ -0
CHMP24386 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHMP24386 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.04■□□□□ -0
CHMP24386 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.04■□□□□ -0
CHMP24386 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.04■□□□□ -0
CHMP24386 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.04■□□□□ -0
CHMP24386 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms