Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.48■□□□□ 0.39
RFX1P22670 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.48■□□□□ 0.39
RFX1P22670 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX1P22670 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX1P22670 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 AC098859.1-201ENST00000502915 1238 ntBASIC17.48■□□□□ 0.39
RFX1P22670 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 AC012183.1-201ENST00000625197 499 ntBASIC17.48■□□□□ 0.39
RFX1P22670 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX1P22670 AC007326.2-201ENST00000624224 7579 ntBASIC17.48■□□□□ 0.39
RFX1P22670 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX1P22670 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 AC046158.3-201ENST00000624947 2558 ntBASIC17.48■□□□□ 0.39
RFX1P22670 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.48■□□□□ 0.39
RFX1P22670 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX1P22670 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX1P22670 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX1P22670 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
RFX1P22670 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RFX1P22670 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX1P22670 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX1P22670 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.47■□□□□ 0.39
RFX1P22670 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.47■□□□□ 0.39
RFX1P22670 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX1P22670 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFX1P22670 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RFX1P22670 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX1P22670 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
RFX1P22670 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RFX1P22670 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX1P22670 AL162727.3-201ENST00000635661 2787 ntBASIC17.46■□□□□ 0.39
RFX1P22670 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RFX1P22670 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RFX1P22670 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX1P22670 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX1P22670 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RFX1P22670 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX1P22670 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX1P22670 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX1P22670 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.46■□□□□ 0.39
RFX1P22670 KRT17P7-201ENST00000451704 1104 ntBASIC17.46■□□□□ 0.39
RFX1P22670 AP005018.1-201ENST00000525475 301 ntBASIC17.46■□□□□ 0.39
RFX1P22670 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX1P22670 AC243562.1-201ENST00000560672 389 ntBASIC17.46■□□□□ 0.39
RFX1P22670 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX1P22670 AC024267.1-201ENST00000582320 895 ntBASIC17.46■□□□□ 0.39
RFX1P22670 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.46■□□□□ 0.39
RFX1P22670 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms