Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
NTF3P20783 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.29□□□□□ -0.44
NTF3P20783 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.29□□□□□ -0.44
NTF3P20783 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.29□□□□□ -0.44
NTF3P20783 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.29□□□□□ -0.44
NTF3P20783 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.29□□□□□ -0.44
NTF3P20783 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NTF3P20783 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NTF3P20783 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NTF3P20783 AC097637.2-201ENST00000624096 1997 ntBASIC12.29□□□□□ -0.44
NTF3P20783 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.28□□□□□ -0.44
NTF3P20783 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 AL671710.1-201ENST00000610245 2349 ntBASIC12.28□□□□□ -0.44
NTF3P20783 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
NTF3P20783 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NTF3P20783 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.28□□□□□ -0.44
NTF3P20783 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
NTF3P20783 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.28□□□□□ -0.44
NTF3P20783 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.28□□□□□ -0.44
NTF3P20783 YBX1P2-201ENST00000489612 999 ntBASIC12.28□□□□□ -0.44
NTF3P20783 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.28□□□□□ -0.44
NTF3P20783 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.28□□□□□ -0.44
NTF3P20783 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.28□□□□□ -0.44
NTF3P20783 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.28□□□□□ -0.44
NTF3P20783 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.28□□□□□ -0.44
NTF3P20783 AC139887.4-201ENST00000607877 719 ntBASIC12.28□□□□□ -0.44
NTF3P20783 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
NTF3P20783 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
NTF3P20783 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 LINC02447-202ENST00000501888 2146 ntBASIC12.28□□□□□ -0.44
NTF3P20783 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NTF3P20783 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.28□□□□□ -0.44
NTF3P20783 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.27□□□□□ -0.44
NTF3P20783 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
NTF3P20783 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NTF3P20783 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NTF3P20783 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
NTF3P20783 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.27□□□□□ -0.44
NTF3P20783 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.27□□□□□ -0.44
NTF3P20783 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.27□□□□□ -0.44
NTF3P20783 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
NTF3P20783 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
NTF3P20783 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.27□□□□□ -0.44
NTF3P20783 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.27□□□□□ -0.44
NTF3P20783 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
NTF3P20783 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NTF3P20783 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NTF3P20783 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.27□□□□□ -0.45
NTF3P20783 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.27□□□□□ -0.45
NTF3P20783 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.27□□□□□ -0.45
NTF3P20783 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.27□□□□□ -0.45
NTF3P20783 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 AP002414.1-201ENST00000391405 1147 ntBASIC12.27□□□□□ -0.45
NTF3P20783 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NTF3P20783 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms