Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB3BP20337 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB3BP20337 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 AC112693.3-201ENST00000624819 1983 ntBASIC14.13□□□□□ -0.15
RAB3BP20337 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB3BP20337 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 C18orf15-201ENST00000623680 2534 ntBASIC14.12□□□□□ -0.15
RAB3BP20337 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RAB3BP20337 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB3BP20337 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB3BP20337 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 RCN1P1-201ENST00000400413 996 ntBASIC14.12□□□□□ -0.15
RAB3BP20337 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB3BP20337 AP000867.3-201ENST00000524675 377 ntBASIC14.12□□□□□ -0.15
RAB3BP20337 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB3BP20337 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB3BP20337 AC012615.1-201ENST00000565797 1299 ntBASIC14.12□□□□□ -0.15
RAB3BP20337 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB3BP20337 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB3BP20337 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB3BP20337 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB3BP20337 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 AC092127.1-201ENST00000567093 3455 ntBASIC14.11□□□□□ -0.15
RAB3BP20337 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB3BP20337 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB3BP20337 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB3BP20337 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB3BP20337 AC132008.2-207ENST00000454517 770 ntBASIC14.11□□□□□ -0.15
RAB3BP20337 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB3BP20337 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB3BP20337 AC106795.1-205ENST00000512851 1056 ntBASIC14.11□□□□□ -0.15
RAB3BP20337 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB3BP20337 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms