Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL645728.2-201ENST00000641974 660 ntBASIC14.13□□□□□ -0.15
ATF1P18846 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.13□□□□□ -0.15
ATF1P18846 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATF1P18846 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATF1P18846 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 AC007292.2-201ENST00000593524 1812 ntBASIC14.13□□□□□ -0.15
ATF1P18846 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATF1P18846 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.12□□□□□ -0.15
ATF1P18846 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ATF1P18846 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 AC105250.1-201ENST00000509378 2057 ntBASIC14.12□□□□□ -0.15
ATF1P18846 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ATF1P18846 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
ATF1P18846 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 PMS2P4-201ENST00000412466 1052 ntBASIC14.12□□□□□ -0.15
ATF1P18846 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 AL513480.1-201ENST00000451731 511 ntBASIC14.12□□□□□ -0.15
ATF1P18846 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 AC108751.1-201ENST00000490852 363 ntBASIC14.12□□□□□ -0.15
ATF1P18846 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.12□□□□□ -0.15
ATF1P18846 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.12□□□□□ -0.15
ATF1P18846 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
ATF1P18846 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.12□□□□□ -0.15
ATF1P18846 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
ATF1P18846 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.12□□□□□ -0.15
ATF1P18846 LINC01101-201ENST00000622953 1884 ntBASIC14.12□□□□□ -0.15
ATF1P18846 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATF1P18846 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
ATF1P18846 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.11□□□□□ -0.15
ATF1P18846 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.11□□□□□ -0.15
ATF1P18846 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.11□□□□□ -0.15
ATF1P18846 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.11□□□□□ -0.15
ATF1P18846 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATF1P18846 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.11□□□□□ -0.15
ATF1P18846 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ATF1P18846 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms