Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.22■□□□□ 0.03
NCK1P16333 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
NCK1P16333 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NCK1P16333 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.22■□□□□ 0.03
NCK1P16333 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.21■□□□□ 0.03
NCK1P16333 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NCK1P16333 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NCK1P16333 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.21■□□□□ 0.03
NCK1P16333 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NCK1P16333 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.21■□□□□ 0.03
NCK1P16333 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 KRT18P27-201ENST00000427733 1299 ntBASIC15.21■□□□□ 0.03
NCK1P16333 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
NCK1P16333 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.21■□□□□ 0.03
NCK1P16333 KRT18P31-201ENST00000506277 1292 ntBASIC15.21■□□□□ 0.03
NCK1P16333 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
NCK1P16333 AL031055.1-201ENST00000606362 631 ntBASIC15.21■□□□□ 0.03
NCK1P16333 AC008667.4-201ENST00000607370 168 ntBASIC15.21■□□□□ 0.03
NCK1P16333 AC091076.1-201ENST00000610741 619 ntBASIC15.21■□□□□ 0.03
NCK1P16333 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
NCK1P16333 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCK1P16333 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.21■□□□□ 0.03
NCK1P16333 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
NCK1P16333 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.21■□□□□ 0.03
NCK1P16333 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.21■□□□□ 0.02
NCK1P16333 AC011477.6-201ENST00000604980 1927 ntBASIC15.21■□□□□ 0.02
NCK1P16333 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.21■□□□□ 0.02
NCK1P16333 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NCK1P16333 CICP23-201ENST00000605013 2741 ntBASIC15.21■□□□□ 0.02
NCK1P16333 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCK1P16333 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NCK1P16333 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NCK1P16333 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NCK1P16333 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
NCK1P16333 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NCK1P16333 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 HMGA1P7-201ENST00000406908 502 ntBASIC15.2■□□□□ 0.02
NCK1P16333 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.2■□□□□ 0.02
NCK1P16333 AC093724.1-201ENST00000448659 1027 ntBASIC15.2■□□□□ 0.02
NCK1P16333 AC136632.2-201ENST00000512891 861 ntBASIC15.2■□□□□ 0.02
NCK1P16333 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NCK1P16333 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.2■□□□□ 0.02
NCK1P16333 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 OR7E47P-204ENST00000575924 449 ntBASIC15.2■□□□□ 0.02
NCK1P16333 MIR4515-201ENST00000584082 81 ntBASIC15.2■□□□□ 0.02
NCK1P16333 ACTL9-202ENST00000612068 1252 ntBASIC15.2■□□□□ 0.02
NCK1P16333 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
NCK1P16333 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NCK1P16333 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCK1P16333 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms